I suppose AVRISPmkII is the most universal. But to run it you need Studio. It can also be run from a command line: avrdude.
There is now [color=green:a9e3e6a64d][b:a9e3e6a64d]avrdudess[/b:a9e3e6a64d][/color:a9e3e6a64d], a GUI for avrdude: [url]http://blog.zakkemble.co.uk/avrdudess-a-gui-for-avrdude/[/url]
It supports :D all programmers that avrdude supports.:D
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