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BASCOM-AVR : ATXMEGA: VPORT Configuration Overwriten : REPLY

yes that is right. you need to specify all the vports at once. if you use a new config, you need to specify again all the vports you like to use. it is like writing to a port : if you write '1' to bit 0 and you want to write bit 1 too, then need to write 3. in your case simply put the config in one line as shown in the help.

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